2KDY image
Deposition Date 2009-01-20
Release Date 2009-02-17
Last Version Date 2024-05-22
Entry Detail
PDB ID:
2KDY
Keywords:
Title:
NMR structure of LP2086-B01
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
17
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Factor H binding protein variant B01_001
Gene (Uniprot):fhbp
Chain IDs:A
Chain Length:261
Number of Molecules:1
Biological Source:Neisseria meningitidis
Ligand Molecules
Primary Citation
Structural Basis for the Immunogenic Properties of the Meningococcal Vaccine Candidate LP2086.
J.Biol.Chem. 284 8738 8746 (2009)
PMID: 19103601 DOI: 10.1074/jbc.M808831200

Abstact

LP2086 is a family of outer membrane lipoproteins from Neisseria meningitidis, which elicits bactericidal antibodies and are currently undergoing human clinical trials in a bivalent formulation where each antigen represents one of the two known LP2086 subfamilies. Here we report the NMR structure of the recombinant LP2086 variant B01, a representative of the LP2086 subfamily B. The structure reveals a novel fold composed of two domains: a "taco-shaped" N-terminal beta-sheet and a C-terminal beta-barrel connected by a linker. The structure in micellar solution is consistent with a model of LP2086 anchored to the outer membrane bilayer through its lipidated N terminus. A long flexible chain connects the folded part of the protein to the lipid anchor and acts as spacer, making both domains accessible to the host immune system. Antibodies broadly reactive against members from both subfamilies have been mapped to the N terminus. A surface of subfamily-defining residues was identified on one face of the protein, offering an explanation for the induction of subfamily-specific bactericidal antibodies.

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Primary Citation of related structures