2K32 image
Deposition Date 2008-04-17
Release Date 2009-02-03
Last Version Date 2024-05-08
Entry Detail
PDB ID:
2K32
Title:
Truncated AcrA from Campylobacter jejuni for glycosylation studies
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:A
Gene (Uniprot):cmeA
Chain IDs:A
Chain Length:116
Number of Molecules:1
Biological Source:Campylobacter jejuni
Ligand Molecules
Primary Citation
NMR structure determination of a segmentally labeled glycoprotein using in vitro glycosylation.
J.Am.Chem.Soc. 131 1274 1281 (2009)
PMID: 19154179 DOI: 10.1021/ja808682v

Abstact

Although there is great interest in three-dimensional structures of glycoproteins and complex oligosaccharides, their structural determination have been hampered by inhomogeneous and incomplete glycosylation, poor expression, low tendency to crystallize, and severe chemical shift overlap. Using segmental labeling of the glycan and the protein component by in vitro glycosylation, we developed a novel method of NMR structural determination that overcomes some of these problems. Highly homogeneously glycosylated proteins in milligram amounts can be obtained. This allowed the determination of the structure of an N-linked glycoprotein from Campylobacter jejuni. The glycosylation acceptor site was found to be in a flexible loop. The presented methodology extends the observable NOE distance limit of oligosaccharides significantly over 4 A, resulting in a high number of distance restraints per glycosidic linkage. A well-defined glycan structure was obtained.

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Primary Citation of related structures
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