2K2D image
Deposition Date 2008-03-31
Release Date 2008-04-15
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2K2D
Title:
Solution NMR structure of C-terminal domain of human pirh2. Northeast Structural Genomics Consortium (NESG) target HT2C
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
15
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:RING finger and CHY zinc finger domain-containing protein 1
Gene (Uniprot):RCHY1
Chain IDs:A
Chain Length:79
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Molecular basis of Pirh2-mediated p53 ubiquitylation.
Nat.Struct.Mol.Biol. 15 1334 1342 (2008)
PMID: 19043414 DOI: 10.1038/nsmb.1521

Abstact

Pirh2 (p53-induced RING-H2 domain protein; also known as Rchy1) is an E3 ubiquitin ligase involved in a negative-feedback loop with p53. Using NMR spectroscopy, we show that Pirh2 is a unique cysteine-rich protein comprising three modular domains. The protein binds nine zinc ions using a variety of zinc coordination schemes, including a RING domain and a left-handed beta-spiral in which three zinc ions align three consecutive small beta-sheets in an interleaved fashion. We show that Pirh2-p53 interaction is dependent on the C-terminal zinc binding module of Pirh2, which binds to the tetramerization domain of p53. As a result, Pirh2 preferentially ubiquitylates the tetrameric form of p53 in vitro and in vivo, suggesting that Pirh2 regulates protein turnover of the transcriptionally active form of p53.

Legend

Protein

Chemical

Disease

Primary Citation of related structures