2K1I image
Deposition Date 2008-03-05
Release Date 2008-10-28
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2K1I
Title:
Synthesis, Structure and Activities of an Oral Mucosal Alpha-Defensin from Rhesus Macaque
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
60
Conformers Submitted:
10
Selection Criteria:
structures with the least restraint violations, strutures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Mucosal Alpha-Defensin
Chain IDs:A
Chain Length:32
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
Synthesis, structure, and activities of an oral mucosal alpha-defensin from rhesus macaque.
J.Biol.Chem. 283 35869 35877 (2008)
PMID: 18930922 DOI: 10.1074/jbc.M806915200

Abstact

The oral cavity is an environment challenged by a large variety of pathogens. Consequently, the antimicrobial peptides expressed in that environment are interesting as they evolved to defend against a broad spectrum of bacteria and fungi. Here we report the discovery of new alpha-defensins from rhesus macaque oral mucosa and determine the first alpha-defensin structure from that species. The new peptides were identified by sequencing of reverse transcriptase-PCR products obtained from oral mucosal tissues, disclosing three mucosal alpha-defensins, termed rhesus macaque oral alpha-defensins (ROADs). The peptide corresponding to fully processed ROAD-1 was synthesized, subjected to folding/oxidation conditions, and purified. ROAD-1 was active against Staphylococcus aureus, Escherichia coli, and Candida albicans in a concentration-dependent manner. We determined the structure of ROAD-1 using NMR spectroscopy and find that the synthetic peptide adopts the canonical disulfide pairing and alpha-defensin fold. The antimicrobial mechanism of defensins has been correlated with their ability to disrupt and permeabilize the cell envelope, activities that depend on the surface features of the folded peptide. Although ROAD-1 maintains the defensin fold, the oral defensin displays distinct surface features when compared with other alpha-defensin structures.

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