2K03 image
Entry Detail
PDB ID:
2K03
Keywords:
Title:
Structure of SDF1 in complex with the CXCR4 N-terminus containing a sulfotyrosine at postition 21
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2008-01-24
Release Date:
2008-10-28
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
target function
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Stromal cell-derived factor 1
Mutations:L36C,A65C
Chain IDs:A, C
Chain Length:70
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:C-X-C chemokine receptor type 4
Mutations:C28A
Chain IDs:B, D
Chain Length:40
Number of Molecules:2
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
TYS B TYR O-SULFO-L-TYROSINE
Ligand Molecules
Primary Citation
Structural basis of CXCR4 sulfotyrosine recognition by the chemokine SDF-1/CXCL12
Sci.Signal. 1 ra4 ra4 (2008)
PMID: 18799424 DOI: 10.1126/scisignal.1160755

Abstact

Stem cell homing and breast cancer metastasis are orchestrated by the chemokine stromal cell-derived factor 1 (SDF-1) and its receptor CXCR4. Here, we report the nuclear magnetic resonance structure of a constitutively dimeric SDF-1 in complex with a CXCR4 fragment that contains three sulfotyrosine residues important for a high-affinity ligand-receptor interaction. CXCR4 bridged the SDF-1 dimer interface so that sulfotyrosines sTyr7 and sTyr12 of CXCR4 occupied positively charged clefts on opposing chemokine subunits. Dimeric SDF-1 induced intracellular Ca2+ mobilization but had no chemotactic activity; instead, it prevented native SDF-1-induced chemotaxis, suggesting that it acted as a potent partial agonist. Our work elucidates the structural basis for sulfotyrosine recognition in the chemokine-receptor interaction and suggests a strategy for CXCR4-targeted drug development.

Legend

Protein

Chemical

Disease

Primary Citation of related structures