2JWT image
Deposition Date 2007-10-24
Release Date 2008-04-01
Last Version Date 2024-05-08
Entry Detail
PDB ID:
2JWT
Keywords:
Title:
Solution structure of Engrailed homeodomain WT
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
50
Conformers Submitted:
25
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Segmentation polarity homeobox protein engrailed
Gene (Uniprot):en
Chain IDs:A
Chain Length:61
Number of Molecules:1
Biological Source:Drosophila melanogaster
Ligand Molecules
Primary Citation
Comparison of multiple crystal structures with NMR data for engrailed homeodomain
J.Biomol.Nmr 40 189 202 (2008)
PMID: 18274703 DOI: 10.1007/s10858-008-9223-9

Abstact

Two methods are currently available to solve high resolution protein structures-X-ray crystallography and nuclear magnetic resonance (NMR). Both methods usually produce highly similar structures, but small differences between both solutions are always observed. Here the raw NMR data as well as the solved NMR structure were compared to the multiple crystal structures solved for the WT 60 residue three helix bundle engrailed homeodomain (EnHD) and single point mutants. There was excellent agreement between TALOS-predicted and crystal structure-observed dihedral angles and a good agreement for the (3) J(H (N) H (alpha)) couplings for the multiple crystal structures. Around 1% of NOEs were violated for any crystal structure, but no NOE was inconsistent with all of the crystal structures. Violations usually occurred for surface residues or for residues for which multiple discreet conformations were observed between the crystal structures. Comparison of the disorder shown in the multiple crystal structures shows little correlation with dynamics under native conditions for this protein.

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Primary Citation of related structures
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