2JTK image
Deposition Date 2007-08-02
Release Date 2008-07-08
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2JTK
Title:
A functional domain of a Wnt signal protein
Biological Source:
Source Organism:
Mus musculus (Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dickkopf-related protein 2
Gene (Uniprot):Dkk2
Chain IDs:A
Chain Length:90
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Structural insight into the mechanisms of wnt signaling antagonism by dkk
J.Biol.Chem. 283 23364 23370 (2008)
PMID: 18524778 DOI: 10.1074/jbc.M802375200

Abstact

Dickkopf (Dkk) proteins are antagonists of the canonical Wnt signaling pathway and are crucial for embryonic cell fate and bone formation. Wnt antagonism of Dkk requires the binding of the C-terminal cysteine-rich domain of Dkk to the Wnt coreceptor, LRP5/6. However, the structural basis of the interaction between Dkk and low density lipoprotein receptor-related protein (LRP) 5/6 is unknown. In this study, we examined the structure of the Dkk functional domain and elucidated its interactions with LRP5/6. Using NMR spectroscopy, we determined the solution structure of the C-terminal cysteine-rich domain of mouse Dkk2 (Dkk2C). Then, guided by mutagenesis studies, we docked Dkk2C to the YWTD beta-propeller domains of LRP5/6 and showed that the ligand binding site of the third LRP5/6 beta-propeller domain matches Dkk2C best, suggesting that this domain binds to Dkk2C with higher affinity. Such differential binding affinity is likely to play an essential role in Dkk function in the canonical Wnt pathway.

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Chemical

Disease

Primary Citation of related structures
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