2JSB image
Deposition Date 2007-07-02
Release Date 2008-02-05
Last Version Date 2024-11-20
Entry Detail
PDB ID:
2JSB
Title:
Solution structure of arenicin-1
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
500
Conformers Submitted:
1
Selection Criteria:
target function
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Arenicin-1
Chain IDs:A
Chain Length:21
Number of Molecules:1
Biological Source:Arenicola marina
Ligand Molecules
Primary Citation
Structure and mode of action of the antimicrobial peptide arenicin
Biochem.J. 410 113 122 (2008)
PMID: 17935487 DOI: 10.1042/BJ20071051

Abstact

The solution structure and the mode of action of arenicin isoform 1, an antimicrobial peptide with a unique 18-residue loop structure, from the lugworm Arenicola marina were elucidated here. Arenicin folds into a two-stranded antiparallel beta-sheet. It exhibits high antibacterial activity at 37 and 4 degrees C against Gram-negative bacteria, including polymyxin B-resistant Proteus mirabilis. Bacterial killing occurs within minutes and is accompanied by membrane permeabilization, membrane detachment and release of cytoplasm. Interaction of arenicin with reconstituted membranes that mimic the lipopolysaccharide-containing outer membrane or the phospholipid-containing plasma membrane of Gram-negative bacteria exhibited no pronounced lipid specificity. Arenicin-induced current fluctuations in planar lipid bilayers correspond to the formation of short-lived heterogeneously structured lesions. Our results strongly suggest that membrane interaction plays a pivotal role in the antibacterial activity of arenicin.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback