2JON image
Deposition Date 2007-03-14
Release Date 2008-01-29
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2JON
Keywords:
Title:
Solution structure of the C-terminal domain Ole e 9
Biological Source:
Source Organism:
Olea europaea (Taxon ID: 4146)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-1,3-glucanase
Gene (Uniprot):OLE9
Chain IDs:A
Chain Length:101
Number of Molecules:1
Biological Source:Olea europaea
Ligand Molecules
Primary Citation
Solution structure of the C-terminal domain of Ole e 9, a major allergen of olive pollen
Protein Sci. 17 371 376 (2008)
PMID: 18096638 DOI: 10.1110/ps.073230008

Abstact

Ole e 9 is an olive pollen allergen belonging to group 2 of pathogenesis-related proteins. The protein is composed of two immunological independent domains: an N-terminal domain (NtD) with 1,3-beta-glucanase activity, and a C-terminal domain (CtD) that binds 1,3-beta-glucans. We have determined the three-dimensional structure of CtD-Ole e 9 (101 amino acids), which consists of two parallel alpha-helices forming an angle of approximately 55 degrees , a small antiparallel beta-sheet with two short strands, and a 3-10 helix turn, all connected by long coil segments, resembling a novel type of folding among allergens. Two regions surrounded by aromatic residues (F49, Y60, F96, Y91 and Y31, H68, Y65, F78) have been localized on the protein surface, and a role for sugar binding is suggested. The epitope mapping of CtD-Ole e 9 shows that B-cell epitopes are mainly located on loops, although some of them are contained in secondary structural elements. Interestingly, the IgG and IgE epitopes are contiguous or overlapped, rather than coincident. The three-dimensional structure of CtD-Ole e 9 might help to understand the underlying mechanism of its biochemical function and to determine possible structure-allergenicity relationships.

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