2JMH image
Deposition Date 2006-11-12
Release Date 2007-11-13
Last Version Date 2023-12-20
Entry Detail
PDB ID:
2JMH
Keywords:
Title:
NMR solution structure of Blo t 5, a major mite allergen from Blomia tropicalis
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
21
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Mite allergen Blo t 5
Gene (Uniprot):BLOT5
Chain IDs:A
Chain Length:119
Number of Molecules:1
Biological Source:Blomia tropicalis
Ligand Molecules
Primary Citation
Roles of Structure and Structural Dynamics in the Antibody Recognition of the Allergen Proteins: An NMR Study on Blomia tropicalis Major Allergen
Structure 16 125 136 (2008)
PMID: 18184590 DOI: 10.1016/j.str.2007.10.022

Abstact

Blo t 5 is the major allergen from Blomia tropicalis mites and shows strong IgE reactivity with up to 90% of asthmatic and rhinitis patients' sera. The NMR solution structure of Blo t 5 comprises three long alpha helices, forming a coiled-coil, triple-helical bundle with a left-handed twist. TROSY-NMR experiments were used to study Blo t 5 interaction with the Fab' of a specific monoclonal antibody, mAb 4A7. The mAb epitope comprises two closely spaced surfaces, I and II, connected by a sharp turn and bearing critical residues Asn46 and Lys47 on one surface, and Lys54 and Arg57 on the other. This discontinuous epitope overlaps with the human IgE epitope(s) of Blo t 5. Epitope surface II is further predicted to undergo conformational exchange in the millisecond to microsecond range. The results presented are critical for the design of a hypoallergenic Blo t 5 for efficacious immunotherapy of allergic diseases.

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Chemical

Disease

Primary Citation of related structures
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