2JM3 image
Deposition Date 2006-09-21
Release Date 2007-02-06
Last Version Date 2024-05-29
Entry Detail
PDB ID:
2JM3
Title:
Solution structure of the THAP domain from C. elegans C-terminal binding protein (CtBP)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
500
Conformers Submitted:
20
Selection Criteria:
lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hypothetical protein
Gene (Uniprot):ctbp-1
Chain IDs:A
Chain Length:91
Number of Molecules:1
Biological Source:Caenorhabditis elegans
Ligand Molecules
Primary Citation
Solution structure of the THAP domain from Caenorhabditis elegans C-terminal binding protein (CtBP).
J.Mol.Biol. 366 382 390 (2007)
PMID: 17174978 DOI: 10.1016/j.jmb.2006.11.058

Abstact

The THAP (Thanatos-associated protein) domain is a recently discovered zinc-binding domain found in proteins involved in transcriptional regulation, cell-cycle control, apoptosis and chromatin modification. It contains a single zinc atom ligated by cysteine and histidine residues within a Cys-X(2-4)-Cys-X(35-53)-Cys-X(2)-His consensus. We have determined the NMR solution structure of the THAP domain from Caenorhabditis elegans C-terminal binding protein (CtBP) and show that it adopts a fold containing a treble clef motif, bearing similarity to the zinc finger-associated domain (ZAD) from Drosophila Grauzone. The CtBP THAP domain contains a large, positively charged surface patch and we demonstrate that this domain can bind to double-stranded DNA in an electrophoretic mobility-shift assay. These data, together with existing reports, indicate that THAP domains might exhibit a functional diversity similar to that observed for classical and GATA-type zinc fingers.

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Primary Citation of related structures