2JKB image
Deposition Date 2008-08-26
Release Date 2008-09-16
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2JKB
Keywords:
Title:
Crystal structure of Streptococcus pneumoniae NanB in complex with 2, 7-anhydro-Neu5Ac
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.54 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:SIALIDASE B
Gene (Uniprot):nanB
Chain IDs:A
Chain Length:686
Number of Molecules:1
Biological Source:STREPTOCOCCUS PNEUMONIAE
Primary Citation
Structural and Functional Studies of Streptococcus Pneumoniae Neuraminidase B: An Intramolecular Trans-Sialidase.
FEBS Lett. 582 3348 ? (2008)
PMID: 18775704 DOI: 10.1016/J.FEBSLET.2008.08.026

Abstact

The human pathogen Streptococcus pneumoniae expresses neuraminidase proteins that cleave sialic acids from complex carbohydrates. The pneumococcus genome encodes up to three neuraminidase proteins that have been shown to be important virulence factors. Here, we report the first structure of a neuraminidase from S. pneumoniae: the crystal structure of NanB in complex with its reaction product 2,7-anhydro-Neu5Ac. Our structural data, together with biochemical analysis, establish NanB as an intramolecular trans-sialidase with strict specificity towards alpha2-3 linked sialic acid substrates. In addition, we show that NanB differs in its substrate specificity from the other pneumococcal neuraminidase NanA.

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Primary Citation of related structures