2JK4 image
Deposition Date 2008-08-15
Release Date 2008-10-14
Last Version Date 2024-05-08
Entry Detail
PDB ID:
2JK4
Keywords:
Title:
Structure of the human voltage-dependent anion channel
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.10 Å
R-Value Free:
0.38
R-Value Work:
0.32
R-Value Observed:
0.33
Space Group:
P 32 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1
Gene (Uniprot):VDAC1
Chain IDs:A
Chain Length:294
Number of Molecules:1
Biological Source:HOMO SAPIENS
Ligand Molecules
Primary Citation
Structure of the Human Voltage-Dependent Anion Channel.
Proc.Natl.Acad.Sci.USA 105 15370 ? (2008)
PMID: 18832158 DOI: 10.1073/PNAS.0808115105

Abstact

The voltage-dependent anion channel (VDAC), also known as mitochondrial porin, is the most abundant protein in the mitochondrial outer membrane (MOM). VDAC is the channel known to guide the metabolic flux across the MOM and plays a key role in mitochondrially induced apoptosis. Here, we present the 3D structure of human VDAC1, which was solved conjointly by NMR spectroscopy and x-ray crystallography. Human VDAC1 (hVDAC1) adopts a beta-barrel architecture composed of 19 beta-strands with an alpha-helix located horizontally midway within the pore. Bioinformatic analysis indicates that this channel architecture is common to all VDAC proteins and is adopted by the general import pore TOM40 of mammals, which is also located in the MOM.

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Primary Citation of related structures