2JA4 image
Deposition Date 2006-11-21
Release Date 2007-03-06
Last Version Date 2024-10-16
Entry Detail
PDB ID:
2JA4
Keywords:
Title:
Crystal structure of CD5 domain III reveals the fold of a group B scavenger cysteine-rich receptor
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.21 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 32 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-CELL SURFACE GLYCOPROTEIN CD5
Gene (Uniprot):CD5
Chain IDs:A
Chain Length:101
Number of Molecules:1
Biological Source:HOMO SAPIENS
Primary Citation
Crystal Structure of the Third Extracellular Domain of Cd5 Reveals the Fold of a Group B Scavenger Cysteine-Rich Receptor Domain.
J.Biol.Chem. 282 12669 ? (2007)
PMID: 17322294 DOI: 10.1074/JBC.M611699200

Abstact

Scavenger receptor cysteine-rich (SRCR) domains are ancient protein modules widely found among cell surface and secreted proteins of the innate and adaptive immune system, where they mediate ligand binding. We have solved the crystal structure at 2.2 A of resolution of the SRCR CD5 domain III, a human lymphocyte receptor involved in the modulation of antigen specific receptor-mediated T cell activation and differentiation signals. The first structure of a member of a group B SRCR domain reveals the fold of this ancient protein module into a central core formed by two antiparallel beta-sheets and one alpha-helix, illustrating the conserved core at the protein level of genes coding for group A and B members of the SRCR superfamily. The novel SRCR group B structure permits the interpretation of site-directed mutagenesis data on the binding of activated leukocyte cell adhesion molecule (ALCAM/CD166) binding to CD6, a closely related lymphocyte receptor homologue to CD5.

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