ISDA: 2J47

Deposition Date 2006-08-25

Release Date 2006-10-03

Last Version Date 2023-12-13

Entry Detail

PDB ID:

2J47

Keywords:

INHIBITOR

Title:

Bacteroides thetaiotaomicron GH84 O-GlcNAcase in complex with a imidazole-pugnac hybrid inhibitor

Biological Source:

Source Organism:

BACTEROIDES THETAIOTAOMICRON (Taxon ID: 226186)

Host Organism:

ESCHERICHIA COLI

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.98 Å

R-Value Free:

0.22

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

C 1 2 1

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:GLUCOSAMINIDASE
Gene (Uniprot):BT_4395
Chain IDs:A
Chain Length:716
Number of Molecules:1
Biological Source:BACTEROIDES THETAIOTAOMICRON

UniProt ID:Q89ZI2 Pfam ID:PF02838, PF07555, PF21809, PF18344 EC:3.2.1.169

Ligand Molecules

GDV

GOL

Primary Citation

Inhibition of O-Glcnacase by a Gluco-Configured Nagstatin and a Pugnac-Imidazole Hybrid Inhibitor

Shanmugasundaram, B, Debowski, A.W, Dennis, R.J, Davies, G.J, Vocadlo, D.J, Vasella, A, Dennis, R.J, Taylor, E.J, Macauley, M.S, Stubbs, K.A, Turkenburg, J.P, Hart, S.J, Black, G.N, Vocadlo, D.J, Davies, G.J.Show

Chem. Commun. 42 4372 ? (2006)

PMID: 17057847 DOI: 10.1039/B612154C

Abstact

Synthesis of a PUGNAc-imidazole hybrid and its characterization as an inhibitor of human O-GlcNAcase through enzyme kinetics and X-ray structural analysis.

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Primary Citation of related structures