2IXF image
Deposition Date 2006-07-08
Release Date 2006-10-11
Last Version Date 2023-12-13
Entry Detail
PDB ID:
2IXF
Keywords:
Title:
Crystal structure of the ATPase domain of TAP1 with ATP (D645Q, Q678H mutant)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ANTIGEN PEPTIDE TRANSPORTER 1
Gene (Uniprot):Tap1
Mutations:YES
Chain IDs:A, B, C, D
Chain Length:271
Number of Molecules:4
Biological Source:RATTUS NORVEGICUS
Primary Citation
Distinct Structural and Functional Properties of the ATPase Sites in an Asymmetric Abc Transporter.
Mol.Cell 24 51 ? (2001)
PMID: 17018292 DOI: 10.1016/J.MOLCEL.2006.07.034

Abstact

The ABC transporter associated with antigen processing (TAP) shuttles cytosolic peptides into the endoplasmic reticulum for loading onto class I MHC molecules. Transport is fueled by ATP binding and hydrolysis at two distinct cytosolic ATPase sites. One site comprises consensus motifs shared among most ABC transporters, while the second has substituted, degenerate motifs. Biochemical and crystallography experiments with a TAP cytosolic domain demonstrate that the consensus ATPase site has high catalytic activity and facilitates ATP-dependent dimerization of the cytosolic domains, which is an important conformational change during transport. In contrast, the degenerate site is defective in dimerization and ATP hydrolysis. Full-length TAP mutagenesis demonstrates the necessity for at least one consensus site, supporting our conclusion that the consensus site is the principal facilitator of substrate transport. Since asymmetry of the ATPase site motifs is a feature of many mammalian homologs, our proposed model has broad implications for ABC transporters.

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