2IXB image
Deposition Date 2006-07-07
Release Date 2007-04-10
Last Version Date 2023-12-13
Entry Detail
PDB ID:
2IXB
Keywords:
Title:
Crystal structure of N-ACETYLGALACTOSAMINIDASE in complex with GalNAC
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 65 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ALPHA-N-ACETYLGALACTOSAMINIDASE
Chain IDs:A
Chain Length:444
Number of Molecules:1
Biological Source:FLAVOBACTERIUM MENINGOSEPTICUM
Primary Citation
Bacterial Glycosidases for the Production of Universal Red Blood Cells.
Nat.Biotechnol. 25 454 ? (2007)
PMID: 17401360 DOI: 10.1038/NBT1298

Abstact

Enzymatic removal of blood group ABO antigens to develop universal red blood cells (RBCs) was a pioneering vision originally proposed more than 25 years ago. Although the feasibility of this approach was demonstrated in clinical trials for group B RBCs, a major obstacle in translating this technology to clinical practice has been the lack of efficient glycosidase enzymes. Here we report two bacterial glycosidase gene families that provide enzymes capable of efficient removal of A and B antigens at neutral pH with low consumption of recombinant enzymes. The crystal structure of a member of the alpha-N-acetylgalactosaminidase family reveals an unusual catalytic mechanism involving NAD+. The enzymatic conversion processes we describe hold promise for achieving the goal of producing universal RBCs, which would improve the blood supply while enhancing the safety of clinical transfusions.

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Primary Citation of related structures