2IX8 image
Entry Detail
PDB ID:
2IX8
Title:
MODEL FOR EEF3 BOUND TO AN 80S RIBOSOME
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2006-07-07
Release Date:
2007-07-10
Method Details:
Experimental Method:
Resolution:
9.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:ELONGATION FACTOR 3A
Chain IDs:A
Chain Length:976
Number of Molecules:1
Biological Source:SACCHAROMYCES CEREVISIAE
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Ligand Molecules
Primary Citation
Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site.
Nature 443 663 668 (2006)
PMID: 16929303 DOI: 10.1038/nature05126

Abstact

Elongation factor eEF3 is an ATPase that, in addition to the two canonical factors eEF1A and eEF2, serves an essential function in the translation cycle of fungi. eEF3 is required for the binding of the aminoacyl-tRNA-eEF1A-GTP ternary complex to the ribosomal A-site and has been suggested to facilitate the clearance of deacyl-tRNA from the E-site. Here we present the crystal structure of Saccharomyces cerevisiae eEF3, showing that it consists of an amino-terminal HEAT repeat domain, followed by a four-helix bundle and two ABC-type ATPase domains, with a chromodomain inserted in ABC2. Moreover, we present the cryo-electron microscopy structure of the ATP-bound form of eEF3 in complex with the post-translocational-state 80S ribosome from yeast. eEF3 uses an entirely new factor binding site near the ribosomal E-site, with the chromodomain likely to stabilize the ribosomal L1 stalk in an open conformation, thus allowing tRNA release.

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Primary Citation of related structures