2IL6 image
Deposition Date 1997-01-31
Release Date 1998-02-04
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2IL6
Keywords:
Title:
HUMAN INTERLEUKIN-6, NMR, 32 STRUCTURES
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
75
Conformers Submitted:
32
Selection Criteria:
LEAST RESTRAINT VIOLATION
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:INTERLEUKIN-6
Gene (Uniprot):IL6
Chain IDs:A
Chain Length:185
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Solution structure of recombinant human interleukin-6.
J.Mol.Biol. 268 468 481 (1997)
PMID: 9159484 DOI: 10.1006/jmbi.1997.0933

Abstact

Interleukin-6 (IL-6) is a 185 amino acid cytokine which exerts multiple biological effects in vivo and whose dysregulation underlies several disease processes. The solution structure of recombinant human interleukin-6 has now been determined using heteronuclear three and four-dimensional NMR spectroscopy. The structure of the molecule was determined using 3044 distance and torsion restraints derived by NMR spectroscopy to generate an ensemble of 32 structures using a combined distance geometry/simulated annealing protocol. The protein contains five alpha-helices interspersed with variable-length loops; four of these helices constitute a classical four-helix bundle with the fifth helix located in the CD loop. There were no distance violations greater than 0.3 A in any of the final 32 structures and the ensemble has an average-to-the-mean backbone root-mean-square deviation of 0.50 A for the core four-helix bundle. Although the amino-terminal 19 amino acids are disordered in solution, the remainder of the molecule has a well defined structure that shares many features displayed by other long-chain four-helix bundle cytokines. The high-resolution NMR structure of hIL-6 is used to rationalize available mutagenesis data in terms of a heteromeric receptor complex.

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Primary Citation of related structures