2I39 image
Deposition Date 2006-08-17
Release Date 2006-11-21
Last Version Date 2024-02-21
Entry Detail
PDB ID:
2I39
Keywords:
Title:
Crystal structure of Vaccinia virus N1L protein
Biological Source:
Source Organism:
Vaccinia virus (Taxon ID: 10245)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.24
R-Value Work:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protein N1
Chain IDs:A, B, C, D, E, F
Chain Length:137
Number of Molecules:6
Biological Source:Vaccinia virus
Ligand Molecules
Primary Citation
Vaccinia virus N1L protein resembles a B cell lymphoma-2 (Bcl-2) family protein.
Protein Sci. 16 118 124 (2007)
PMID: 17123957 DOI: 10.1110/ps.062454707

Abstact

Poxviruses encode immuno-modulatory proteins capable of subverting host defenses. The poxvirus vaccinia expresses a small 14-kDa protein, N1L, that is critical for virulence. We report the crystal structure of N1L, which reveals an unexpected but striking resemblance to host apoptotic regulators of the B cell lymphoma-2 (Bcl-2) family. Although N1L lacks detectable Bcl-2 homology (BH) motifs at the sequence level, we show that N1L binds with high affinity to the BH3 peptides of pro-apoptotic Bcl-2 family proteins in vitro, consistent with a role for N1L in modulating host antiviral defenses.

Legend

Protein

Chemical

Disease

Primary Citation of related structures