2I0C image
Deposition Date 2006-08-10
Release Date 2006-11-21
Last Version Date 2024-11-20
Entry Detail
PDB ID:
2I0C
Title:
Crystal structure of the GluR6 ligand binding core dimer crosslinked by disulfide bonds between Y490C and L752C at 2.25 Angstroms Resolution
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.24
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glutamate receptor, ionotropic kainate 2
Gene (Uniprot):Grik2
Mutations:Y490C, L752C, S775E
Chain IDs:A, B
Chain Length:259
Number of Molecules:2
Biological Source:Rattus norvegicus
Ligand Molecules
Primary Citation
Conformational restriction blocks glutamate receptor desensitization.
Nat.Struct.Mol.Biol. 13 1120 1127 (2006)
PMID: 17115050 DOI: 10.1038/nsmb1178

Abstact

Desensitization is a universal feature of ligand-gated ion channels. Using the crystal structure of the GluR2 L483Y mutant channel as a guide, we attempted to build non-desensitizing kainate-subtype glutamate receptors. Success was achieved for GluR5, GluR6 and GluR7 with intermolecular disulfide cross-links but not by engineering the dimer interface. Crystallographic analysis of the GluR6 Y490C L752C dimer revealed relaxation from the active conformation, which functional studies reveal is not sufficient to trigger desensitization. The equivalent non-desensitizing cross-linked GluR2 mutant retained weak sensitivity to a positive allosteric modulator, which had no effect on GluR2 L483Y. These results establish that the active conformation of AMPA and kainate receptors is conserved and further show that their desensitization requires dimer rearrangements, that subtle structural differences account for their diverse functional properties and that the ligand-binding core dimer is a powerful regulator of ion-channel activity.

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Primary Citation of related structures