ISDA

Deposition Date 2006-08-01

Release Date 2007-08-07

Last Version Date 2023-10-25

Entry Detail

PDB ID:

2HWQ

Keywords:

LIGAND BINDING PROTEIN

Title:

Structural basis for the structure-activity relationships of Peroxisome Proliferator-Activated Receptor agonists

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.97 Å

R-Value Free:

0.26

R-Value Work:

0.23

R-Value Observed:

0.23

Space Group:

P 1 21 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Peroxisome proliferator-activated receptor gamma
Gene (Uniprot):PPARG
Chain IDs:A, B
Chain Length:271
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:P37231 Pfam ID:PF00104

Ligand Molecules

DRY

Primary Citation

Structural basis for the structure-activity relationships of peroxisome proliferator-activated receptor agonists

Mahindroo, N, Peng, Y.H, Lin, C.H, Tan, U.K, Prakash, E, Lien, T.W, Lu, I.L, Lee, H.J, Hsu, J.T.A, Chen, X, Liao, C.C, Lyu, P.C, Chao, Y.S, Wu, S.Y, Hsieh, H.P.Show

J.Med.Chem. 49 6421 6424 (2006)

PMID: 17034149 DOI: 10.1021/jm060663c

Abstact

Type 2 diabetes has rapidly reached an epidemic proportion becoming a major threat to global public health. PPAR agonists have emerged as a leading class of oral antidiabetic drugs. We report a structure biology analysis of novel indole-based PPAR agonists to explain the structure-activity relationships and present a critical analysis of reasons for change in selectivity with change in the orientation of the same scaffolds. The results would be helpful in designing novel PPAR agonists.

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Primary Citation of related structures