ISDA

Deposition Date 2006-08-01

Release Date 2006-11-07

Last Version Date 2023-08-30

Entry Detail

PDB ID:

2HWH

Keywords:

TRANSFERASE

Title:

HCV NS5B allosteric inhibitor complex

Biological Source:

Source Organism:

Hepatitis C virus (Taxon ID: 11103)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.30 Å

R-Value Free:

0.27

R-Value Work:

0.23

R-Value Observed:

0.23

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:RNA-directed RNA polymerase (NS5B) (p68)
Chain IDs:A, B
Chain Length:576
Number of Molecules:2
Biological Source:Hepatitis C virus

UniProt ID:P26663 Pfam ID:PF00998 EC:3.4.21.98

Ligand Molecules

RNA

Primary Citation

Structure-based design of a novel thiazolone scaffold as HCV NS5B polymerase allosteric inhibitors.

Yan, S, Appleby, T, Larson, G, Wu, J.Z, Hamatake, R, Hong, Z, Yao, N.Show

Bioorg.Med.Chem.Lett. 16 5888 5891 (2006)

PMID: 16934455 DOI: 10.1016/j.bmcl.2006.08.056

Abstact

A structure-based approach was performed to design a novel thiazolone scaffold as HCV NS5B inhibitors. A focused library was designed and docked by GOLD. One of the top-scored molecules was synthesized and shown to have similar potency to the initial hit. The X-ray complex structure was determined and validated our design rationale.

Legend

Protein

Chemical

Disease

Primary Citation of related structures