2HKI image
Deposition Date 2006-07-04
Release Date 2006-11-14
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2HKI
Keywords:
Title:
Crystal structure of photosynthetic glyceraldehyde-3-phosphate dehydrogenase A4 isoform
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
I 41 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast
Gene (Uniprot):GAPA
Chain IDs:A
Chain Length:337
Number of Molecules:1
Biological Source:Spinacia oleracea
Ligand Molecules
Primary Citation
Crystallization and structural analysis of GADPH from Spinacia oleracea in a new form.
Acta Crystallogr.,Sect.F 62 1087 1092 (2006)
PMID: 17077485 DOI: 10.1107/S174430910604200X

Abstact

Two crystalline forms of GADPH (D-glyceraldehyde-3-phosphate dehydrogenase) from Spinacia oleracea were obtained using sitting-drop vapor diffusion. Despite the very low concentration of GADPH in the solutions, two crystalline forms were obtained, one of which was the previously reported C222 space group with unit-cell parameters a = 155.3, b = 181.7, c = 107.6 A and the other of which belonged to a new space group I4(1)22, with unit-cell parameters a = b = 120.9, c = 154.5 A. Diffraction data were measured from both native and derivatives, yielding structures at a resolution limit of 3.0 A. Differences at the NAD(+)/NADP(+)-binding site seen in these structures compared with the previously reported structure with bound coenzyme suggest that conformational changes associated with pyridine-nucleotide binding may play a role in the regulation of this enzyme.

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