2H25 image
Deposition Date 2006-05-18
Release Date 2006-10-31
Last Version Date 2024-05-29
Entry Detail
PDB ID:
2H25
Title:
Solution Structure of Maltose Binding Protein complexed with beta-cyclodextrin
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
40
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Maltose-binding periplasmic protein
Gene (Uniprot):malE
Chain IDs:A
Chain Length:370
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
A new strategy for structure determination of large proteins in solution without deuteration
Nat.Methods 3 931 937 (2006)
PMID: 17060917 DOI: 10.1038/nmeth938

Abstact

So far high-resolution structure determination by nuclear magnetic resonance (NMR) spectroscopy has been limited to proteins <30 kDa, although global fold determination is possible for substantially larger proteins. Here we present a strategy for assigning backbone and side-chain resonances of large proteins without deuteration, with which one can obtain high-resolution structures from (1)H-(1)H distance restraints. The strategy uses information from through-bond correlation experiments to filter intraresidue and sequential correlations from through-space correlation experiments, and then matches the filtered correlations to obtain sequential assignment. We demonstrate this strategy on three proteins ranging from 24 to 65 kDa for resonance assignment and on maltose binding protein (42 kDa) and hemoglobin (65 kDa) for high-resolution structure determination. The strategy extends the size limit for structure determination by NMR spectroscopy to 42 kDa for monomeric proteins and to 65 kDa for differentially labeled multimeric proteins without the need for deuteration or selective labeling.

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Primary Citation of related structures