2GYD image
Deposition Date 2006-05-09
Release Date 2006-06-13
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2GYD
Title:
Complex of equine apoferritin with the H-diaziflurane photolabeling reagent
Biological Source:
Source Organism:
Equus caballus (Taxon ID: 9796)
Method Details:
Experimental Method:
Resolution:
1.72 Å
R-Value Free:
0.21
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
F 4 3 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ferritin L subunit
Chain IDs:A
Chain Length:170
Number of Molecules:1
Biological Source:Equus caballus
Primary Citation
Photoactive analogues of the haloether anesthetics provide high-resolution features from low-affinity interactions.
Acs Chem.Biol. 1 377 384 (2006)
PMID: 17163775 DOI: 10.1021/cb600207d

Abstact

The difficulty in obtaining binding target and site information for low-affinity drugs, like the inhaled anesthetics, has limited identification of their molecular effectors. Because such information can be provided by photoactive analogues, we designed, synthesized, and characterized a novel diazirnyl haloether that closely mimics isoflurane, the most widely used clinical general anesthetic. This compound, H-diaziflurane, is a nontoxic, potent anesthetic that potentiates GABA-gated ion channels in primary cultures of hippocampal neurons. Calorimetric and structural characterizations show that H-diaziflurane binds a model anesthetic host protein with similar energetics as isoflurane and forms photoadducts with residues lining the isoflurane binding site. H-diaziflurane will be immediately useful for identifying targets and sites important for the molecular pharmacology of the inhaled haloether anesthetics.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback