2GYD image
Deposition Date 2006-05-09
Release Date 2006-06-13
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2GYD
Title:
Complex of equine apoferritin with the H-diaziflurane photolabeling reagent
Biological Source:
Source Organism:
Equus caballus (Taxon ID: 9796)
Method Details:
Experimental Method:
Resolution:
1.72 Å
R-Value Free:
0.21
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
F 4 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ferritin L subunit
Chain IDs:A
Chain Length:170
Number of Molecules:1
Biological Source:Equus caballus
Primary Citation
Photoactive analogues of the haloether anesthetics provide high-resolution features from low-affinity interactions.
Acs Chem.Biol. 1 377 384 (2006)
PMID: 17163775 DOI: 10.1021/cb600207d

Abstact

The difficulty in obtaining binding target and site information for low-affinity drugs, like the inhaled anesthetics, has limited identification of their molecular effectors. Because such information can be provided by photoactive analogues, we designed, synthesized, and characterized a novel diazirnyl haloether that closely mimics isoflurane, the most widely used clinical general anesthetic. This compound, H-diaziflurane, is a nontoxic, potent anesthetic that potentiates GABA-gated ion channels in primary cultures of hippocampal neurons. Calorimetric and structural characterizations show that H-diaziflurane binds a model anesthetic host protein with similar energetics as isoflurane and forms photoadducts with residues lining the isoflurane binding site. H-diaziflurane will be immediately useful for identifying targets and sites important for the molecular pharmacology of the inhaled haloether anesthetics.

Legend

Protein

Chemical

Disease

Primary Citation of related structures