2GX8 image
Deposition Date 2006-05-08
Release Date 2006-05-16
Last Version Date 2024-02-14
Entry Detail
PDB ID:
2GX8
Title:
The Crystal Structure of Bacillus cereus protein related to NIF3
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.26
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NIF3-related protein
Chain IDs:A, B, C
Chain Length:397
Number of Molecules:3
Biological Source:Bacillus cereus
Primary Citation
The 2.2 A resolution crystal structure of Bacillus cereus Nif3-family protein YqfO reveals a conserved dimetal-binding motif and a regulatory domain
Protein Sci. 16 1285 1293 (2007)
PMID: 17586767 DOI: 10.1110/ps.062674007

Abstact

YqfO of Bacillus cereus is a member of the widespread Nif3 family of proteins, which has been highlighted as an important target for structural genomics. The N- and C-terminal domains are conserved across the family and contain a dimetal-binding motif in a putative active site. YqfO contains an insert in the middle of the protein, present in a minority of bacterial family members. The structure of YqfO was determined at a resolution of 2.2 A and reveals conservation of the putative active site. It also reveals the previously unknown structure of the insert, which despite extremely limited sequence conservation, bears great similarity to PII, CutA, and a number of other trimeric regulatory proteins. Our results suggest that this domain acts as a signal sensor to regulate the still-unknown catalytic activity of the more-conserved domains.

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Primary Citation of related structures