ISDA

Deposition Date 2006-05-02

Release Date 2007-01-23

Last Version Date 2024-11-20

Entry Detail

PDB ID:

2GVF

Keywords:

HYDROLASE

Title:

HCV NS3-4A protease domain complexed with a macrocyclic ketoamide inhibitor, SCH419021

Biological Source:

Source Organism:

Hepatitis C virus (Taxon ID: 11103)
(Taxon ID: )

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.50 Å

R-Value Free:

0.27

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

H 3 2

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:polyprotein
Chain IDs:A, C
Chain Length:199
Number of Molecules:2
Biological Source:Hepatitis C virus

UniProt ID:P26664 Pfam ID:PF02907, PF01006

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Polyprotein
Chain IDs:B, D
Chain Length:23
Number of Molecules:2
Biological Source:

UniProt ID:P26664 Pfam ID:PF02907, PF01006

Ligand Molecules

NHN

Primary Citation

P2-P4 macrocyclic inhibitors of hepatitis C virus NS3-4A serine protease.

Arasappan, A, Njoroge, F.G, Chen, K.X, Venkatraman, S, Parekh, T.N, Gu, H, Pichardo, J, Butkiewicz, N, Prongay, A, Madison, V, Girijavallabhan, V, Kim, J.L, Morgenstern, K.A, Lin, C, Fox, T, Dwyer, M, Landro, J.A, Chambers, S.P, Markland, W, Lepre, C, O'Malley, E, Yi, M, Tong, X, Skelton, A, Chase, R, Chen, T, Prongay, A, Bogen, S.L, Saksena, A.K, Njoroge, F.G, Veselenak, R.L, Pyles, R.B, Bourne, N, Malcolm, B.A, Lemon, S.M, Liu, Y, Stoll, V.S, Richardson, P.L, Saldivar, A, Klaus, J.L, Molla, A, Kohlbrenner, W, Kati, W.M, Arasappan, A, Njoroge, F.G, Chan, T.-Y, Bennett, F, Bogen, S.L, Chen, K, Gu, H, Hong, L, Jao, E, Liu, Y.-T, Lovey, R.G, Parekh, T, Pike, R.E, Pinto, P, Santhanam, B, Venkatraman, S, Vaccaro, H, Wang, H, Yang, X, Zhu, Z, McKittrick, B, Saksena, A.K, Girijavallabhan, V, Pichardo, J, Butkiewicz, N, Ingram, R, Malcolm, B, Prongay, A.J, Yao, N, Marten, B, Madison, V, Kemp, S, Levy, O, Lim-Wilby, M, Tamura, S, Ganguly, A.K.Show

Bioorg.Med.Chem.Lett. 16 3960 3965 (2006)

PMID: 16730985 DOI: 10.1016/j.bmcl.2006.05.022

Abstact

Synthesis and HCV NS3 serine protease inhibitory activity of 4-hydroxyproline derived macrocyclic inhibitors and SAR around this macrocyclic core is described in this communication. X-ray structure of inhibitor 38 bound to the protease is discussed.

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