2GUC image
Entry Detail
PDB ID:
2GUC
Title:
Crystal structure of a complex of griffithsin with mannose at 1.78 A resolution.
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2006-04-29
Release Date:
2006-08-01
Method Details:
Experimental Method:
Resolution:
1.79 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:griffithsin
Chain IDs:A, B
Chain Length:122
Number of Molecules:2
Biological Source:Griffithsia
Primary Citation
Domain-swapped structure of the potent antiviral protein griffithsin and its mode of carbohydrate binding.
Structure 14 1127 1135 (2006)
PMID: 16843894 DOI: 10.1016/j.str.2006.05.017

Abstact

The crystal structure of griffithsin, an antiviral lectin from the red alga Griffithsia sp., was solved and refined at 1.3 A resolution for the free protein and 0.94 A for a complex with mannose. Griffithsin molecules form a domain-swapped dimer, in which two beta strands of one molecule complete a beta prism consisting of three four-stranded sheets, with an approximate 3-fold axis, of another molecule. The structure of each monomer bears close resemblance to jacalin-related lectins, but its dimeric structure is unique. The structures of complexes of griffithsin with mannose and N-acetylglucosamine defined the locations of three almost identical carbohydrate binding sites on each monomer. We have also shown that griffithsin is a potent inhibitor of the coronavirus responsible for severe acute respiratory syndrome (SARS). Antiviral potency of griffithsin is likely due to the presence of multiple, similar sugar binding sites that provide redundant attachment points for complex carbohydrate molecules present on viral envelopes.

Legend

Protein

Chemical

Disease

Primary Citation of related structures