2GTT image
Deposition Date 2006-04-28
Release Date 2006-09-19
Last Version Date 2023-10-18
Entry Detail
PDB ID:
2GTT
Title:
Crystal structure of the rabies virus nucleoprotein-RNA complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.49 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nucleoprotein
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V
Chain Length:450
Number of Molecules:22
Biological Source:Lyssavirus rabies
Polymer Type:polyribonucleotide
Molecule:RNA (99-MER)
Chain IDs:W
Chain Length:99
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polyribonucleotide
Molecule:RNA (99-MER)
Chain IDs:X
Chain Length:99
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Crystal Structure of the Rabies Virus Nucleoprotein-RNA Complex
Science 313 360 363 (2006)
PMID: 16778023 DOI: 10.1126/science.1125280

Abstact

Negative-strand RNA viruses condense their genome into a helical nucleoprotein-RNA complex, the nucleocapsid, which is packed into virions and serves as a template for the RNA-dependent RNA polymerase complex. The crystal structure of a recombinant rabies virus nucleoprotein-RNA complex, organized in an undecameric ring, has been determined at 3.5 angstrom resolution. Polymerization of the nucleoprotein is achieved by domain exchange between protomers, with flexible hinges allowing nucleocapsid formation. The two core domains of the nucleoprotein clamp around the RNA at their interface and shield it from the environment. RNA sequestering by nucleoproteins is likely a common mechanism used by negative-strand RNA viruses to protect their genomes from the innate immune response directed against viral RNA in human host cells at certain stages of an infectious cycle.

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Disease

Primary Citation of related structures