2GK3 image
Deposition Date 2006-03-31
Release Date 2006-05-02
Last Version Date 2024-10-30
Entry Detail
PDB ID:
2GK3
Title:
Cytoplasmic Protein STM3548 from Salmonella typhimurium
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:putative cytoplasmic protein
Gene (Uniprot):STM3548
Chain IDs:A, B, C, D, E, F
Chain Length:256
Number of Molecules:6
Biological Source:Salmonella typhimurium
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Ligand Molecules
Primary Citation
Novel hexamerization motif is discovered in a conserved cytoplasmic protein from Salmonella typhimurium.
J.Struct.Funct.Genom. 8 19 25 (2007)
PMID: 17968677 DOI: 10.1007/s10969-007-9028-1

Abstact

The cytoplasmic protein Stm3548 of unknown function obtained from a strain of Salmonella typhimurium was determined by X-ray crystallography at a resolution of 2.25 A. The asymmetric unit contains a hexamer of structurally identical monomers. The monomer is a globular domain with a long beta-hairpin protrusion that distinguishes this structure. This beta-hairpin occupies a central position in the hexamer, and its residues participate in the majority of interactions between subunits of the hexamer. We suggest that the structure of Stm3548 presents a new hexamerization motif. Because the residues participating in interdomain interactions are highly conserved among close members of protein family DUF1355 and buried solvent accessible area for the hexamer is significant, the hexamer is most likely conserved as well. A light scattering experiment confirmed the presence of hexamer in solution.

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Primary Citation of related structures