2GEW image
Deposition Date 2006-03-20
Release Date 2006-05-02
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2GEW
Keywords:
Title:
Atomic resolution structure of cholesterol oxidase @ pH 9.0 (Streptomyces sp. SA-COO)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
0.97 Å
R-Value Free:
0.14
R-Value Work:
0.11
R-Value Observed:
0.11
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cholesterol oxidase
Gene (Uniprot):choA
Chain IDs:A
Chain Length:504
Number of Molecules:1
Biological Source:Streptomyces sp.
Primary Citation
Atomic resolution crystallography reveals how changes in pH shape the protein microenvironment.
Nat.Chem.Biol. 2 259 264 (2006)
PMID: 16604066 DOI: 10.1038/nchembio784

Abstact

Hydrogen atoms are a vital component of enzyme structure and function. In recent years, atomic resolution crystallography (>or=1.2 A) has been successfully used to investigate the role of the hydrogen atom in enzymatic catalysis. Here, atomic resolution crystallography was used to study the effect of pH on cholesterol oxidase from Streptomyces sp., a flavoenzyme oxidoreductase. Crystallographic observations of the anionic oxidized flavin cofactor at basic pH are consistent with the UV-visible absorption profile of the enzyme and readily explain the reversible pH-dependent loss of oxidation activity. Furthermore, a hydrogen atom, positioned at an unusually short distance from the main chain carbonyl oxygen of Met122 at high pH, was observed, suggesting a previously unknown mechanism of cofactor stabilization. This study shows how a redox active site responds to changes in the enzyme's environment and how these changes are able to influence the mechanism of enzymatic catalysis.

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Primary Citation of related structures
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