2FUN image
Deposition Date 2006-01-27
Release Date 2006-06-27
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2FUN
Title:
alternative p35-caspase-8 complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.25
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Early 35 kDa protein
Gene (Uniprot):P35
Chain IDs:A, C
Chain Length:298
Number of Molecules:2
Biological Source:Autographa californica nucleopolyhedrovirus
Polymer Type:polypeptide(L)
Molecule:caspase-8
Gene (Uniprot):CASP8
Chain IDs:B, D
Chain Length:258
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Native chemical ligation in covalent caspase inhibition by p35.
Chem.Biol. 13 117 122 (2006)
PMID: 16492559 DOI: 10.1016/j.chembiol.2005.12.007

Abstact

Wide-spectrum caspase inhibition by the baculoviral p35 protein was previously shown to be a consequence of covalent inhibition in which a thioester bond is stably formed between the cleavage residue Asp87 of p35 and the active site Cys360' of caspase-8. Here we show that the N-terminal fragment of cleaved p35 (p35-N) is a circular peptide when dissociated from the caspase. Biochemical and crystallographic data suggest that p35-N circularization results from the trapping of a native chemical ligation intermediate in the p35/caspase complex, in which the N-terminal Cys2 of p35 attacks the Asp87-Cys360' thioester to form an equilibrium between Asp87-Cys2 and Asp87-Cys360'. This provides a crucial covalent interaction for keeping the N terminus of p35 bound in the caspase active site, which explains the absolute requirement of Cys2 for caspase inhibition. Participation of native chemical ligation in caspase inhibition by p35 illustrates an unusual mechanism of protease inhibition.

Legend

Protein

Chemical

Disease

Primary Citation of related structures