2FTN image
Deposition Date 2006-01-24
Release Date 2006-05-02
Last Version Date 2024-10-30
Entry Detail
PDB ID:
2FTN
Keywords:
Title:
E. coli thymidylate synthase Y94F mutant
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
I 21 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Thymidylate synthase
Gene (Uniprot):thyA
Mutations:Y94F
Chain IDs:A
Chain Length:264
Number of Molecules:1
Biological Source:Escherichia coli
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CXM A MET N-CARBOXYMETHIONINE
Ligand Molecules
Primary Citation
Structure of the Y94F mutant of Escherichia coli thymidylate synthase.
ACTA CRYSTALLOGR.,SECT.F 62 840 843 (2006)
PMID: 16946460 DOI: 10.1107/S1744309106029691

Abstact

Tyr94 of Escherichia coli thymidylate synthase is thought to be involved, either directly or by activation of a water molecule, in the abstraction of a proton from C5 of the 2'-deoxyuridine 5'-monophosphate (dUMP) substrate. Mutation of Tyr94 leads to a 400-fold loss in catalytic activity. The structure of the Y94F mutant has been determined in the native state and as a ternary complex with thymidine 5'-monophosphate (dTMP) and 10-propargyl 5,8-dideazafolate (PDDF). There are no structural changes ascribable to the mutation other than loss of a water molecule hydrogen bonded to the tyrosine OH, which is consistent with a catalytic role for the phenolic OH.

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Primary Citation of related structures