2FGK image
Deposition Date 2005-12-22
Release Date 2006-08-08
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2FGK
Title:
Crystal structure of the ABC-cassette E631Q mutant of HlyB with bound ATP
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Alpha-hemolysin translocation ATP-binding protein hlyB
Gene (Uniprot):hlyB
Mutagens:E631Q
Chain IDs:A, B, C, D
Chain Length:247
Number of Molecules:4
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
A structural analysis of asymmetry required for catalytic activity of an ABC-ATPase domain dimer.
Embo J. 25 3432 3443 (2006)
PMID: 16858415 DOI: 10.1038/sj.emboj.7601208

Abstact

The ATP-binding cassette (ABC)-transporter haemolysin (Hly)B, a central element of a Type I secretion machinery, acts in concert with two additional proteins in Escherichia coli to translocate the toxin HlyA directly from the cytoplasm to the exterior. The basic set of crystal structures necessary to describe the catalytic cycle of the isolated HlyB-NBD (nucleotide-binding domain) has now been completed. This allowed a detailed analysis with respect to hinge regions, functionally important key residues and potential energy storage devices that revealed many novel features. These include a structural asymmetry within the ATP dimer that was significantly enhanced in the presence of Mg2+, indicating a possible functional asymmetry in the form of one open and one closed phosphate exit tunnel. Guided by the structural analysis, we identified two amino acids, closing one tunnel by an apparent salt bridge. Mutation of these residues abolished ATP-dependent cooperativity of the NBDs. The implications of these new findings for the coupling of ATP binding and hydrolysis to functional activity are discussed.

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Primary Citation of related structures