2F4A image
Entry Detail
PDB ID:
2F4A
Keywords:
Title:
Triclinic cross-linked lysozyme soaked with thiourea 1.5M
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2005-11-23
Release Date:
2006-04-25
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.16
R-Value Work:
0.16
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Lysozyme C
Chain IDs:A
Chain Length:129
Number of Molecules:1
Biological Source:Gallus gallus
Primary Citation
On the edge of the denaturation process: Application of X-ray diffraction to barnase and lysozyme cross-linked crystals with denaturants in molar concentrations.
Biochim.Biophys.Acta 1764 903 912 (2006)
PMID: 16600702 DOI: 10.1016/j.bbapap.2006.02.009

Abstact

Structural data about the early step of protein denaturation were obtained from cross-linked crystals for two small proteins: barnase and lysozyme. Several denaturant agents like urea, bromoethanol or thiourea were used at increasing concentrations up to a limit leading to crystal disruption (>or=2 to 6 M). Before the complete destruction of the crystal order started, specific binding sites were observed at the protein surfaces, an indication that the preliminary step of denaturation is the disproportion of intermolecular polar bonds to the benefit of the agent "parasiting" the surface. The analysis of the thermal factors first agree with a stabilization effect at low or moderate concentration of denaturants rapidly followed by a destabilization at specific weak points when the number of sites increase (overflooding effect).

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