2F2L image
Deposition Date 2005-11-17
Release Date 2006-04-04
Last Version Date 2024-11-20
Entry Detail
PDB ID:
2F2L
Title:
Crystal structure of tracheal cytotoxin (TCT) bound to the ectodomain complex of peptidoglycan recognition proteins LCa (PGRP-LCa) and LCx (PGRP-LCx)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Peptidoglycan-recognition protein-LC isoform LCa
Gene (Uniprot):PGRP-LC
Chain IDs:A
Chain Length:167
Number of Molecules:1
Biological Source:Drosophila melanogaster
Polymer Type:polypeptide(L)
Molecule:Peptidoglycan recognition protein-LC isoform LCx
Chain IDs:B (auth: X)
Chain Length:167
Number of Molecules:1
Biological Source:Drosophila melanogaster
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
CSO A CYS S-HYDROXYCYSTEINE
Primary Citation
Structure of tracheal cytotoxin in complex with a heterodimeric pattern-recognition receptor.
Science 311 1761 1764 (2006)
PMID: 16556841 DOI: 10.1126/science.1123056

Abstact

Tracheal cytotoxin (TCT), a naturally occurring fragment of Gram-negative peptidoglycan, is a potent elicitor of innate immune responses in Drosophila. It induces the heterodimerization of its recognition receptors, the peptidoglycan recognition proteins (PGRPs) LCa and LCx, which activates the immune deficiency pathway. The crystal structure at 2.1 angstrom resolution of TCT in complex with the ectodomains of PGRP-LCa and PGRP-LCx shows that TCT is bound to and presented by the LCx ectodomain for recognition by the LCa ectodomain; the latter lacks a canonical peptidoglycan-docking groove conserved in other PGRPs. The interface, revealed in atomic detail, between TCT and the receptor complex highlights the importance of the anhydro-containing disaccharide in bridging the two ectodomains together and the critical role of diaminopimelic acid as the specificity determinant for PGRP interaction.

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Primary Citation of related structures