2F0C image
Deposition Date 2005-11-13
Release Date 2006-03-28
Last Version Date 2023-08-23
Entry Detail
PDB ID:
2F0C
Keywords:
Title:
Structure of the Receptor Binding Protein (ORF49, bbp) from lactophage tp901-1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.65 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Phage tp901-1 ORF49 (BPP)
Gene (Uniprot):bpp
Chain IDs:A, B, C
Chain Length:191
Number of Molecules:3
Biological Source:Lactococcus phage TP901-1
Ligand Molecules
Primary Citation
Modular structure of the receptor binding proteins of Lactococcus lactis phages. The RBP structure of the temperate phage TP901-1.
J.Biol.Chem. 281 14256 14262 (2006)
PMID: 16549427 DOI: 10.1074/jbc.M600666200

Abstact

Lactococcus lactis is a gram-positive bacterium widely used by the dairy industry. Several industrial L. lactis strains are sensitive to various distinct bacteriophages. Most of them belong to the Siphoviridae family and comprise several species, among which the 936 and P335 are prominent. Members of these two phage species recognize their hosts through the interaction of their receptor-binding protein (RBP) with external cell wall saccharidices of the host, the "receptors." We report here the 1.65 A resolution crystal structure of the RBP from phage TP901-1, a member of the P335 species. This RBP of 163 amino acids is a homotrimer comprising three domains: a helical N terminus, an interlaced beta-prism, and a beta-barrel, the head domain (residues 64-163), which binds a glycerol molecule. Fluorescence quenching experiments indicated that the RBP exhibits high affinity for glycerol, muramyl-dipeptide, and other saccharides in solution. The structural comparison of this RBP with that of lactococcal phage p2 RBP, a member of the 936 species (Spinelli, S., Desmyter, A., Verrips, C. T., de Haard, J. W., Moineau, S., and Cambillau, C. (2006) Nat. Struct. Mol. Biol. 13, 85-89) suggests a large extent of modularity in RBPs of lactococcal phages.

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Primary Citation of related structures