2EVS image
Deposition Date 2005-10-31
Release Date 2006-11-14
Last Version Date 2023-08-23
Entry Detail
PDB ID:
2EVS
Keywords:
Title:
Crystal structure of human Glycolipid Transfer Protein complexed with n-hexyl-beta-D-glucoside
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glycolipid transfer protein
Gene (Uniprot):GLTP
Chain IDs:A, B (auth: E)
Chain Length:209
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol. 4 e362 e362 (2006)
PMID: 17105344 DOI: 10.1371/journal.pbio.0040362

Abstact

Glycosphingolipids (GSLs) play major roles in cellular growth and development. Mammalian glycolipid transfer proteins (GLTPs) are potential regulators of cell processes mediated by GSLs and display a unique architecture among lipid binding/transfer proteins. The GLTP fold represents a novel membrane targeting/interaction domain among peripheral proteins. Here we report crystal structures of human GLTP bound to GSLs of diverse acyl chain length, unsaturation, and sugar composition. Structural comparisons show a highly conserved anchoring of galactosyl- and lactosyl-amide headgroups by the GLTP recognition center. By contrast, acyl chain chemical structure and occupancy of the hydrophobic tunnel dictate partitioning between sphingosine-in and newly-observed sphingosine-out ligand-binding modes. The structural insights, combined with computed interaction propensity distributions, suggest a concerted sequence of events mediated by GLTP conformational changes during GSL transfer to and/or from membranes, as well as during GSL presentation and/or transfer to other proteins.

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