2EU8 image
Deposition Date 2005-10-28
Release Date 2006-06-27
Last Version Date 2023-08-23
Entry Detail
PDB ID:
2EU8
Keywords:
Title:
Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q199R)
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Adenylate kinase
Gene (Uniprot):adk
Mutagens:Q199R
Chain IDs:A, B
Chain Length:216
Number of Molecules:2
Biological Source:Bacillus subtilis
Primary Citation
In vivo molecular evolution reveals biophysical origins of organismal fitness.
Mol.Cell 22 441 449 (2006)
PMID: 16713575 DOI: 10.1016/j.molcel.2006.04.012

Abstact

In nature, evolution occurs through the continuous adaptation of a population to its environment. At the molecular level, adaptive changes in protein sequence and expression impact organismal fitness and, consequently, dictate population dynamics. Here, we have used a "weak link" method to favor variations in one gene, allowing adaptation to thermostability to be studied in molecular detail as bacteria were grown continuously for approximately 1500 generations. Surprisingly, only six mutant alleles, representing less than 1% of the possible missense mutations, were observed, suggesting a highly constrained molecular landscape during protein evolution. The changes in organismal fitness were linked directly to incremental increases in enzyme stability and activity maxima and corresponded to the narrow temperature ranges where each mutant enjoyed success within the overall population. Thus, continuous evolution of a single gene permits a quantitative approach that extends from the phenotypes of the microbial populations to their underlying biophysical basis.

Legend

Protein

Chemical

Disease

Primary Citation of related structures