2EF7 image
Deposition Date 2007-02-21
Release Date 2007-08-21
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2EF7
Keywords:
Title:
Crystal structure of ST2348, a hypothetical protein with CBS domains from Sulfolobus tokodaii strain7
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hypothetical protein ST2348
Gene (Uniprot):ST2348
Chain IDs:A, B
Chain Length:133
Number of Molecules:2
Biological Source:Sulfolobus tokodaii
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Primary Citation
Crystal structure of ST2348, a CBS domain protein, from hyperthermophilic archaeon Sulfolobus tokodaii
Biochem.Biophys.Res.Commun. 375 124 128 (2008)
PMID: 18691556 DOI: 10.1016/j.bbrc.2008.07.140

Abstact

The crystal structure of a hypothetical protein ST2348 (GI: 47118305) from the hyperthermophilic bacteria Sulfolobus tokodaii has been determined using X-ray crystallography. The protein consists of two CBS (cystathione beta synthase) domains, whose function has been analyzed and reported here. PSI-BLAST shows a conservation of this domain in about 100 proteins in various species. However, none of the close homologs of ST2348 have been functionally characterized so far. Structure and sequence comparison of ST2348 with human AMP-kinase gamma1 subunit and the CBS domain pair of bacterial IMP dehydrogenase is suggestive of its binding to AMP and ATP. A highly conserved residue Asp118, located in a negatively charged patch near the ligand binding cleft, could serve as a site for phosphorylation similar to that found in the chemotatic signal protein CheY and thereby ST2348 can function as a signal transduction molecule.

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Primary Citation of related structures