2DUT image
Deposition Date 2006-07-26
Release Date 2006-08-08
Last Version Date 2023-10-25
Entry Detail
PDB ID:
2DUT
Title:
Crystal structure of a M-loop deletion variant of MENT in the native conformation
Biological Source:
Source Organism:
Gallus gallus (Taxon ID: 9031)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.29
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
P 32
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Heterochromatin-associated protein MENT
Gene (Uniprot):SERPINB10
Mutations:deletion mutant
Chain IDs:A, B, C, D
Chain Length:423
Number of Molecules:4
Biological Source:Gallus gallus
Primary Citation
X-ray crystal structure of MENT: evidence for functional loop-sheet polymers in chromatin condensation
Embo J. 25 3144 3155 (2006)
PMID: 16810322 DOI: 10.1038/sj.emboj.7601201

Abstact

Most serpins are associated with protease inhibition, and their ability to form loop-sheet polymers is linked to conformational disease and the human serpinopathies. Here we describe the structural and functional dissection of how a unique serpin, the non-histone architectural protein, MENT (Myeloid and Erythroid Nuclear Termination stage-specific protein), participates in DNA and chromatin condensation. Our data suggest that MENT contains at least two distinct DNA-binding sites, consistent with its simultaneous binding to the two closely juxtaposed linker DNA segments on a nucleosome. Remarkably, our studies suggest that the reactive centre loop, a region of the MENT molecule essential for chromatin bridging in vivo and in vitro, is able to mediate formation of a loop-sheet oligomer. These data provide mechanistic insight into chromatin compaction by a non-histone architectural protein and suggest how the structural plasticity of serpins has adapted to mediate physiological, rather than pathogenic, loop-sheet linkages.

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