2DDC image
Deposition Date 2006-01-27
Release Date 2006-03-07
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2DDC
Title:
Unique behavior of a histidine responsible for an engineered green-to-red photoconversion process
Biological Source:
Source Organism:
Favia favus (Taxon ID: 102203)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.55 Å
R-Value Free:
0.21
R-Value Work:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:photoconvertible fluorescent protein
Gene (Uniprot):KikGR
Mutagens:M1V, L12V, E70K, P144S, Q197L
Chain IDs:A, B
Chain Length:227
Number of Molecules:2
Biological Source:Favia favus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CR8 A HIS ?
Primary Citation
The E1 mechanism in photo-induced beta-elimination reactions for green-to-red conversion of fluorescent proteins.
Chem.Biol. 16 1140 1147 (2009)
PMID: 19942137 DOI: 10.1016/j.chembiol.2009.10.010

Abstact

KikGR is a fluorescent protein engineered to display green-to-red photoconvertibility that is induced by irradiation with ultraviolet or violet light. Similar to Kaede and EosFP, two naturally occurring photoconvertible proteins, KikGR contains a His(62)-Tyr(63)-Gly(64) tripeptide sequence, which forms a green chromophore that can be photoconverted to a red one via formal beta-elimination and subsequent extension of a pi-conjugated system. Using a crystallizable variant of KikGR, we determined the structures of both the green and red state at 1.55 A resolution. The double bond between His(62)-C(alpha) and His(62)-C(beta) in the red chromophore is in a cis configuration, indicating that rotation along the His(62) C(alpha)-C(beta) bond occurs following cleavage of the His(62) N(alpha)-C(alpha) bond. This structural rearrangement provides evidence that the beta-elimination reaction governing the green-to-red photoconversion of KikGR follows an E1 (elimination, unimolecular) mechanism.

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Primary Citation of related structures
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