2DC3 image
Deposition Date 2005-12-21
Release Date 2006-05-23
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2DC3
Title:
Crystal structure of human cytoglobin at 1.68 angstroms resolution
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.68 Å
R-Value Free:
0.18
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytoglobin
Gene (Uniprot):CYGB
Chain IDs:A, B
Chain Length:193
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
High-resolution structure of human cytoglobin: identification of extra N- and C-termini and a new dimerization mode.
Acta Crystallogr.,Sect.D 62 671 677 (2006)
PMID: 16699195 DOI: 10.1107/S0907444906013813

Abstact

Cytoglobin (Cgb) is a recently discovered member of the vertebrate haem-containing globin family. The structure of a new crystal form of wild-type human Cgb (space group C2) was determined at a resolution of 1.68 Angstrom. The results show the presence of an additional helix in the N-terminal residues (4-20) prior to the A helix and an ordered loop structure in the C-terminal region (168-188), while these extended peptides were invisible owing to disorder in the previously reported structures using a P3(2)21 crystal at a resolution of 2.4 Angstrom. A detailed comparison of the two crystal structures shows differences in the conformation of the residues (i.e. Arg84) in the haem environment owing to a different dimeric arrangement.

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