2CI9 image
Deposition Date 2006-03-17
Release Date 2006-04-24
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2CI9
Keywords:
Title:
Nck1 SH2-domain in complex with a dodecaphosphopeptide from EPEC protein Tir
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
ESCHERICHIA COLI (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CYTOPLASMIC PROTEIN NCK1
Gene (Uniprot):NCK1
Chain IDs:A, B
Chain Length:102
Number of Molecules:2
Biological Source:HOMO SAPIENS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TRANSLOCATED INTIMIN RECEPTOR
Chain IDs:C (auth: L), D (auth: M)
Chain Length:12
Number of Molecules:2
Biological Source:ESCHERICHIA COLI
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
PTR C TYR O-PHOSPHOTYROSINE
Primary Citation
The Phosphotyrosine Peptide Binding Specificity of Nck1 and Nck2 Src Homology 2 Domains.
J.Biol.Chem. 281 18236 ? (2006)
PMID: 16636066 DOI: 10.1074/JBC.M512917200

Abstact

Nck proteins are essential Src homology (SH) 2 and SH3 domain-bearing adapters that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. Two mammalian pathogens, enteropathogenic Escherichia coli and vaccinia virus, exploit Nck as part of their infection strategy. Conflicting data indicate potential differences in the recognition specificities of the SH2 domains of the isoproteins Nck1 (Nckalpha) and Nck2 (Nckbeta and Grb4). We have characterized the binding specificities of both SH2 domains and find them to be essentially indistinguishable. Crystal structures of both domains in complex with phosphopeptides derived from the enteropathogenic E. coli protein Tir concur in identifying highly conserved, specific recognition of the phosphopeptide. Differential peptide recognition can therefore not account for the preference of either Nck in particular signaling pathways. Binding studies using sequentially mutated, high affinity phosphopeptides establish the sequence variability tolerated in peptide recognition. Based on this binding motif, we identify potential new binding partners of Nck1 and Nck2 and confirm this experimentally for the Arf-GAP GIT1.

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Primary Citation of related structures
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