2CGY image
Deposition Date 2006-03-10
Release Date 2007-03-13
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2CGY
Title:
STRUCTURE OF HELIX POMATIA AGGLUTININ WITH FORSMANN ANTIGEN
Biological Source:
Source Organism:
HELIX POMATIA (Taxon ID: 6536)
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.32
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 63 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:AGGLUTININ
Gene (Uniprot):hpa
Chain IDs:A
Chain Length:101
Number of Molecules:1
Biological Source:HELIX POMATIA
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Ligand Molecules
Peptide-like Molecules
PRD_900083
Primary Citation
Structural Basis for Recognition of Breast and Colon Cancer Epitopes Tn Antigen and Forssman Disaccharide by Helix Pomatia Lectin.
Glycobiology 17 1077 ? (2007)
PMID: 17652409 DOI: 10.1093/GLYCOB/CWM077

Abstact

Helix pomatia agglutinin (HPA) is a lectin that has been used extensively in histopathology, since its binding to tissue sections from breast and colon cancers is correlated with the worst prognosis for the patients. The lectin recognizes alpha-d-N-acetylgalactosamine (alphaGalNAc) containing epitopes which are only present in cancer cell lines having a high likelihood to undergo metastasis, such as the HT29 cancer colon cell line. Several breast cancer cell lines have also been shown to be labeled, although IGROV1, an ovarian cancer cell line, is not. Inhibition studies, using GalNAc monosaccharides, are reported here, showing that the labeling is dependent upon the presence of carbohydrate epitopes. The crystal structures of the lectin complexed with two GalNAc containing epitopes associated with cancer, the Tn (alphaGalNAc-Ser) and Forssman (alphaGalNAc1-3GalNAc) antigens, show the lectin's specificity for GalNAc is due to a particular network of hydrogen bonds. A histidine residue makes hydrophobic contact with the aglycon, rationalizing the preference for GalNAc bearing an additional sugar or amino acid in the alpha position. These structures provide the molecular basis for the use of HPA in metastasis research.

Legend

Protein

Chemical

Disease

Primary Citation of related structures