2CG4 image
Deposition Date 2006-02-27
Release Date 2006-04-04
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2CG4
Keywords:
Title:
Structure of E.coli AsnC
Biological Source:
Source Organism:
ESCHERICHIA COLI (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.29
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
P 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:REGULATORY PROTEIN ASNC
Gene (Uniprot):asnC
Mutations:YES
Chain IDs:A, B
Chain Length:152
Number of Molecules:2
Biological Source:ESCHERICHIA COLI
Primary Citation
Structural Insight Into Gene Transcriptional Regulation and Effector Binding by the Lrp/Asnc Family.
Nucleic Acids Res. 34 1439 ? (2006)
PMID: 16528101 DOI: 10.1093/NAR/GKL009

Abstact

The Lrp/AsnC family of transcriptional regulatory proteins is found in both archaea and bacteria. Members of the family influence cellular metabolism in both a global (Lrp) and specific (AsnC) manner, often in response to exogenous amino acid effectors. In the present study we have determined both the first bacterial and the highest resolution structures for members of the family. Escherichia coli AsnC is a specific gene regulator whose activity is triggered by asparagine binding. Bacillus subtilis LrpC is a global regulator involved in chromosome condensation. Our AsnC-asparagine structure is the first for a regulator-effector complex and is revealed as an octameric disc. Key ligand recognition residues are identified together with a route for ligand access. The LrpC structure reveals a stable octamer supportive of a topological role in dynamic DNA packaging. The structures yield significant clues to the functionality of Lrp/AsnC-type regulators with respect to ligand binding and oligomerization states as well as to their role in specific and global DNA regulation.

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