2CDQ image
Entry Detail
PDB ID:
2CDQ
Keywords:
Title:
Crystal structure of Arabidopsis thaliana aspartate kinase complexed with lysine and S- adenosylmethionine
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2006-01-26
Release Date:
2006-05-30
Method Details:
Experimental Method:
Resolution:
2.85 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
I 41
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:ASPARTOKINASE
Chain IDs:A, B
Chain Length:510
Number of Molecules:2
Biological Source:ARABIDOPSIS THALIANA
Primary Citation
A Novel Organization of Act Domains in Allosteric Enzymes Revealed by the Crystal Structure of Arabidopsis Aspartate Kinase
Plant Cell 18 1681 ? (2006)
PMID: 16731588 DOI: 10.1105/TPC.105.040451

Abstact

Asp kinase catalyzes the first step of the Asp-derived essential amino acid pathway in plants and microorganisms. Depending on the source organism, this enzyme contains up to four regulatory ACT domains and exhibits several isoforms under the control of a great variety of allosteric effectors. We report here the dimeric structure of a Lys and S-adenosylmethionine-sensitive Asp kinase isoform from Arabidopsis thaliana in complex with its two inhibitors. This work reveals the structure of an Asp kinase and an enzyme containing two ACT domains cocrystallized with its effectors. Only one ACT domain (ACT1) is implicated in effector binding. A loop involved in the binding of Lys and S-adenosylmethionine provides an explanation for the synergistic inhibition by these effectors. The presence of S-adenosylmethionine in the regulatory domain indicates that ACT domains are also able to bind nucleotides. The organization of ACT domains in the present structure is different from that observed in Thr deaminase and in the regulatory subunit of acetohydroxyacid synthase III.

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