2C1H image
Deposition Date 2005-09-14
Release Date 2005-12-02
Last Version Date 2025-10-01
Entry Detail
PDB ID:
2C1H
Keywords:
Title:
The X-ray Structure of Chlorobium vibrioforme 5-Aminolaevulinic Acid Dehydratase Complexed with a Diacid Inhibitor
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.32
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 4 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DELTA-AMINOLEVULINIC ACID DEHYDRATASE
Gene (Uniprot):hemB
Chain IDs:A, B
Chain Length:328
Number of Molecules:2
Biological Source:CHLOROBIUM VIBRIOFORME
Primary Citation
Structure of Chlorobium Vibrioforme 5-Aminolaevulinic Acid Dehydratase Complexed with a Diacid Inhibitor.
Acta Crystallogr.,Sect.D 61 1594 ? (2005)
PMID: 16304458 DOI: 10.1107/S0907444905030350

Abstact

The structure of Chlorobium vibrioforme 5-aminolaevulinic acid dehydratase (ALAD) complexed with the irreversible inhibitor 4,7-dioxosebacic acid has been solved. The inhibitor binds by forming Schiff-base linkages with lysines 200 and 253 at the active site. The structure reported here provides a definition of the interactions made by both of the substrate molecules (A-side and P-side substrates) with the C. vibrioforme ALAD and is compared and contrasted with structures of the same inhibitor bound to Escherichia coli and yeast ALAD. The structure suggests why 4,7-dioxosebacic acid is a better inhibitor of the zinc-dependent ALADs than of the zinc-independent ALADs.

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Disease

Primary Citation of related structures
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