2BX5 image
Deposition Date 2005-07-22
Release Date 2006-11-15
Last Version Date 2024-10-23
Entry Detail
PDB ID:
2BX5
Keywords:
Title:
Is FR1 the antibody's Achillies heel
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.29
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 64 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:VD9 VKI LIGHT-CHAIN
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O
Chain Length:107
Number of Molecules:15
Biological Source:HOMO SAPIENS
Primary Citation
Beta-Edge Interactions in a Pentadecameric Human Antibody Vkappa Domain.
J.Mol.Biol. 367 603 ? (2007)
PMID: 17292396 DOI: 10.1016/J.JMB.2006.10.093

Abstact

Antibodies are the archetypal molecules of the Ig-fold superfamily. Their highly conserved beta-sheet architecture has evolved to avoid aggregation by protecting edge strands. However, the crystal structure of a human V kappa domain described here, reveals an exposed beta-edge strand which mediates assembly of a helical pentadecameric oligomer. This edge strand is highly conserved in V kappa domains but is both shortened and capped by the use of two sequential trans-proline residues in V lambda domains. We suggest that the exposure of this beta-edge in V kappa domains may explain why light-chain deposition disease is mediated predominantly by kappa antibodies.

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Protein

Chemical

Disease

Primary Citation of related structures